Study: HCA LungMAP COVID-19 Barbry Lung 59216 cells

Tissue Type(s): Lung

Contributed by: Pascal Barbry, Université Côte d’Azur, CNRS, IPMC, Sophia-Antipolis, 06560, France

Manuscript: Integrated analyses of single-cell atlases reveal age, gender, and smoking status associations with cell type-specific expression of mediators of SARS-CoV-2 viral entry and highlights inflammatory programs in putative target cells (

Description: This study allows one to visualize and query genes as well as explore cell types, technical batches, and cell metrics associated with the manuscript. If published, this version of the data set is focused on the manuscript and is a subset of what may be made available by the original manuscript. 

Original Publication: Deprez, M., Zaragosi, L.-E., Truchi, M., Garcia, S. R., Arguel, M.-J., Lebrigand, K., Paquet, A., Pee’r, D., Marquette, C.-H., Leroy, S., & Barbry, P. (2019). A single-cell atlas of the human healthy airways. In bioRxiv (p. 2019.12.21.884759).

Full dataset: The full dataset is unpublished at this time, relevant processed data is shared here in the downloads tab.