<< SCP bookmarks and cross-study gene search More info

April 25, 2024

Want to find datasets that have your cell type or disease of interest that express a specific gene? Combine SCP study search with cross-study gene search to look for useful datasets. Re-visiting refined views of data visualizations within SCP is now easier with SCP Bookmarks! 

 

Cross-study gene search

 

On the SCP home page, you can look for datasets with any combination of criteria. Once you've settled on the best search criteria, you can now click the Search genes tab on the SCP home page and perform a gene search limited to those studies. This search view can be bookmarked so you can revisit the gene search or perform different gene searches in the future on the same set of studies. (Search results may change over time as datasets are added to SCP).

 

You can visually inspect the violin plots to identify a subset of interesting studies. On the SCP home page, you can set up a search for specific studies by typing their study accessions into the Search by text box and use the search result to restrict cross-study gene search to a particular set of studies. 

How to get started? Log in to SCP, create a study search or visit a study and find the star. Your bookmarks will be accessible from any device that can view a webpage.